Oxford Statistics Phasing Server

A service for accurately phasing sequenced samples using reference panels of haplotypes

This is a free service for phasing high coverage sequenced human samples hosted by the Department of Statistics, University of Oxford. The approach uses large reference panels of haplotypes from the Haplotype Reference Consortium, together with novel statistical methods implemented in the SHAPEIT2 program to carry out highly accurate phasing.

You can upload VCF files containing called genotypes. Phasing will proceed on a secure server, and once completed, you will be able to download the resulting haplotypes.

Server access